Finally the first Linux distro in a long time I can use without any eyestrain: a custom Raspbian build using the new Raspberry open source driver. It's still buggy but promises to be complete in March 2016. No eye problems either on the high res framebuffer console or X server. The latest Linux Kernel 4.4 has this new driver included. 4.5 is going to have hardware acceleration.
I wonder what the technical differences are between the old proprietary driver (eye strain) and the new open source driver. Hopefully they don't re-introduce the problem while adding more features.
http://dri.freedesktop.org/wiki/VC4/
It links to the custom Raspbian image: http://sukzessiv.net/~gohai/vc4-buildbot/build/
While I'm on it, this is how to disable all LED lights of a Raspberry Pi 2:
Ethernet LEDs: https://www.raspberrypi.org/forums/viewtopic.php?f=63&t=72070
Status LEDs: https://www.raspberrypi.org/forums/viewtopic.php?p=136266#p136266