I have the same problem as many of you. I've had this for 20 years. CCFLS with PWM caused some problems, but LED and AMOLEDs worse. I've thus far identified it to be only PWM. I get red eyes and in the morning my eyes feel like I have sand in my eyes, if I've used a PWM display for some hours during the previous day.
I had Sony Z3+, which was completely problem free, but I got frustrated with it's bad battery, since I then to use the phone quite a bit. I got first LG G5 based on Notebookcheck review that stated it would not have PWM. Turned out that it has a high frequency PWM at lower than 35%. But for some reason, I was unable to use it even with higher brightness without problems.
I got the Huawei Mate 9 also based on the Notebookcheck review. I confirmend with my DSLR that it does not have a PWM. I also tested with some high shutter speeds at a camera store like 1/8000 and 1/32000 but I was not able to see any PWM. I tried to use it for 2 weeks, but my eyes were so red and irritated constantly, that I had to return it.
I got a Sony XZ again based on the Notebookcheck review and based on the fact that Z3+ or Z2 or my Sony Android TV do not give me any problems. For the 2 first days I thought it is OK, but then after the Nougat upgrade, I started noticing the same eyestrain and now after 5 days, my eyes are again very red and irritated. I checked with my DSLR and noticed that again, contrary to the Noteboockcheck review, it does have PWM at lower that about 30 % (There is no value on the slider so cannot say exactly at which % it does start). But now I've tried to use it at higher brightness but it still causes eye strain. I'm baffled, as I have not had any dithering or driver issues before, but now it seems that either the Huawei Mate 9, LG G5 and Sony ZX have some dithering or driver issue in Android Nougat, or then they actually do have some very high frequency PWM that I cannot detect with my DSLR. But clearly non usable devices.